batmen-lab / BioMANIA

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Error during Quick Start installation #7

Open mkojima123 opened 5 days ago

mkojima123 commented 5 days ago

Thank you for sharing this App.

I followed the installation instructions from https://github.com/batmen-lab/BioMANIA#setup-dataset-and-models, but I encountered an error. I am using a Conda environment with Python 3.10 and pip 21.3.1.

INFO: This is taking longer than usual. You might need to provide the dependency resolver with stricter constraints to reduce runtime. See https://pip.pypa.io/warnings/backtracking for guidance. If you want to abort this run, press Ctrl + C.
INFO: This is taking longer than usual. You might need to provide the dependency resolver with stricter constraints to reduce runtime. See https://pip.pypa.io/warnings/backtracking for guidance. If you want to abort this run, press Ctrl + C.
  Downloading jax-0.4.27-py3-none-any.whl (1.9 MB)
     |████████████████████████████████| 1.9 MB 1.7 MB/s
  Downloading jax-0.4.26-py3-none-any.whl (1.9 MB)
     |████████████████████████████████| 1.9 MB 1.5 MB/s
ERROR: Exception:
Traceback (most recent call last):
  File "/home/biomania/python3.10_2/miniconda/lib/python3.10/site-packages/pip/_internal/cli/base_command.py", line 164, in exc_logging_wrapper
    status = run_func(*args)
  File "/home/biomania/python3.10_2/miniconda/lib/python3.10/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
    return func(self, options, args)
  File "/home/biomania/python3.10_2/miniconda/lib/python3.10/site-packages/pip/_internal/commands/install.py", line 338, in run
    requirement_set = resolver.resolve(
  File "/home/biomania/python3.10_2/miniconda/lib/python3.10/site-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
    result = self._result = resolver.resolve(
  File "/home/biomania/python3.10_2/miniconda/lib/python3.10/site-packages/pip/_vendor/resolvelib/resolvers.py", line 482, in resolve
    state = resolution.resolve(requirements, max_rounds=max_rounds)
  File "/home/biomania/python3.10_2/miniconda/lib/python3.10/site-packages/pip/_vendor/resolvelib/resolvers.py", line 393, in resolve
    raise ResolutionTooDeep(max_rounds)
pip._vendor.resolvelib.resolvers.ResolutionTooDeep: 2000000

Could you please advise me on how to successfully install it?

Thank you

DoraDong-2023 commented 4 days ago

Thanks for your attention in BioMANIA! Sadly I couldn't repeat your error so I would only recommend some possible directions to try.

If you have any further info for locating the issue for discussion, feel free to copy and paste here. Thanks!