bayesiancook
commented
3 years ago Dear Mattia,
slow reply, sorry.. I assume this is a numerical error. I am currently working on a new version of cross-validation. If this problem appears again, then I could work this out.
best,
nicolas
Hello!
I am running a cross validation for 3 models (CAT-GTR, CAT-F81 and LG-C60), but I am having an issue in the last step (readpb_mpi -cv cvb1_test.ali -x 100 10 CAT_GTRcvb1_learn.ali) ONLY on the CAT-GTR analysis:
read data from file : cvb1_learn.ali number of taxa : 38 number of sites : 262978 number of states: 20 read data from file : cvb1_test.ali number of taxa : 38 number of sites : 29219 number of states: 20 burnin: 100 every 10 points until 1100 .-432731 .-432768 .-432748 .-432743 .-432773 .-432737 .-432737 .-432705 .-432731 .-432700 .-432752 .-432705 .-432702 .-432736 .error in DrawUniformizedSubstitutionNumber: normalising constant 1.46526e-08 1.44747e-08 2.51613 5 18 19 terminate called without an active exception
=================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = PID 108725 RUNNING AT bp1-13-13-04.data.bp.acrc.priv = EXIT CODE: 6 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES
Have you ever had an error like this?
Best, Mattia