npchar
commented
6 years ago The Informatic staff of my lab (thanx Erwann) helped me to fix it (I mean to change the gcc version). It looks like there is major change in gcc which have an issue with the phylobayes compilation.
sudo apt-get remove gcc-6-base
sudo apt-get remove g++-6
sudo apt-get install g++-4.9
sudo apt-get install gcc-4.9
sudo ln -s /usr/bin/gcc-4.9 /usr/bin/gcc
sudo ln -s /usr/bin/g++-4.9 /usr/bin/g++ And then going to pbmpi/sources and compiling with make. This solution will work only if you are in the sudoers group.
bayesiancook
Hi there, Just to report a compilation problem with gcc 6.3 from a Debian fresh install (stretch) :
I have no idea how to deal with that. I tried to install gcc4.9 (which worked great for phylobayes mpi compilation on many computer I worked on) but I did something wrong and badly didn't succeed.
Still, looks like something problematic with gcc 6 ? Is someone have an idea of what it's going on ? Very interested to fix it...
Thanks a lot for all the great work you are doing !
Pierre