wrong key ('N-content') used in the script select_samples.py; should be 'N-Content'

baymlab / wastewater_analysis

Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification

MIT License

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wrong key ('N-content') used in the script select_samples.py; should be 'N-Content' #3

Closed irinak128 closed 3 years ago

irinak128 commented 3 years ago

I got an error KeyError: 'N-content' when trying building reference set with metadata file downloaded 2021-09-29. The correct field name is 'N-Content'. The script works with changing 'N-content' to 'N-Content'.

thank you for these scripts! works great!

jbaaijens commented 3 years ago

Hi @irinak128, thanks for catching this. I'm still in the process of testing the new scripts, sorry. Will finish testing tomorrow and update the scripts + manual!