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baynec2
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mspms
R package for the analysis of Multiplex Substrate Profiling by Mass Spectrometry for Proteases (MSP-MS) Data
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plot_cleavages
#29
baynec2
closed
1 week ago
2
make it easy for user to see what cleavages are used to make icelogo.
#28
baynec2
closed
1 week ago
2
change loaded data to the cathepsin dataset from manuscript
#27
baynec2
closed
1 week ago
1
Simplify names of peptide library
#26
baynec2
closed
1 week ago
1
add fragpipe parser
#25
baynec2
closed
1 week ago
1
change code structure to be compatible with bioconductor classes
#24
baynec2
closed
1 week ago
1
Icelogo n
#23
baynec2
closed
3 weeks ago
1
Possible issues with T-test function.
#22
baynec2
closed
4 weeks ago
1
ice logo plot legend
#21
baynec2
closed
4 weeks ago
1
column labels of heatmap are white
#20
baynec2
closed
3 weeks ago
1
heatmap static image
#19
baynec2
opened
2 months ago
0
Full length peptides
#18
baynec2
closed
2 months ago
2
QC metrics
#17
baynec2
closed
2 months ago
1
plot_heatmap
#16
baynec2
closed
4 months ago
1
change M to n in peptide sequences.
#15
baynec2
closed
4 months ago
1
make time heatmap column label continuous
#14
baynec2
closed
4 months ago
1
mspms function
#13
baynec2
closed
4 months ago
1
automated report
#12
baynec2
closed
4 months ago
1
add automated motif plotting function
#11
baynec2
closed
4 months ago
1
volcano plot ordering
#10
baynec2
closed
4 months ago
1
position in library count of cleavage
#9
baynec2
closed
4 months ago
1
quality score differences
#8
baynec2
opened
4 months ago
1
PTM support
#7
baynec2
closed
4 months ago
1
calculate all possible nmers from any list of peptides
#6
baynec2
closed
5 months ago
1
support for other upstream MS processing software
#5
baynec2
closed
4 months ago
2
real sequence vs match sequence
#4
baynec2
closed
5 months ago
1
motif analysis
#3
baynec2
closed
4 months ago
3
add function to plot over time
#2
baynec2
closed
5 months ago
1
N from cleavage event
#1
baynec2
closed
5 months ago
1