bbglab / intogen-plus

a framework for automatic and comprehensive knowledge extraction based on mutational data from sequenced tumor samples from patients.
https://www.intogen.org/search
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When downloading mupit_modbase.sql.gz (Network is unreachable) #34

Open JIAJZHAN-Kairos opened 1 month ago

JIAJZHAN-Kairos commented 1 month ago
wget http://karchinlab.org/data/HotMAPS/mupit_modbase.sql.gz -O /g/data/gx8/projects/Jiajun_intogen/intogen-plus-2023/datasets/hotmaps/mupit_database.db.mysql.gz
--2024-07-28 05:20:19--  http://karchinlab.org/data/HotMAPS/mupit_modbase.sql.gz
Resolving karchinlab.org (karchinlab.org)... 162.129.223.26
Connecting to karchinlab.org (karchinlab.org)|162.129.223.26|:80... failed: Network is unreachable.
make: *** [datasets/hotmaps/hotmaps.mk:15: /g/data/gx8/projects/Jiajun_intogen/intogen-plus-2023/datasets/hotmaps/mupit_database.db] Error 4

I was trying to download manually, but 404.

skanwal commented 1 month ago

This was also reported to HotMAPS https://github.com/KarchinLab/HotMAPS/issues/1 but no comments have been made since March.

FedericaBrando commented 1 month ago

Hi all,

Thanks for letting us know about the installation issue with HotMAPS database. Our team is already working on a solution to implement it in the next release, that will happen soon. Thanks for your patience

Bests,

Federica

skanwal commented 1 month ago

Hi @FedericaBrando ,

Thanks for the response. Can we please get the ETA for the next release? This will greatly help us plan analysis for our project.

JIAJZHAN-Kairos commented 1 month ago

Hi all,

Thanks for letting us know about the installation issue with HotMAPS database. Our team is already working on a solution to implement it in the next release, that will happen soon. Thanks for your patient

Bests,

Federica

Hi Federica,

Thank you for the update and for your team’s efforts in resolving the issue. We appreciate your quick action on this matter. Could you please let us know the expected timeframe for the next release?

FedericaBrando commented 1 month ago

It will be released this fall, thanks for your patience!