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bbi-lab
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bbi-sci
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add custom mouse_ttbk1 ref genome
#79
athuyvo
closed
3 weeks ago
0
Hash dup patch
#78
athuyvo
closed
3 months ago
0
Update dash
#77
athuyvo
closed
3 months ago
0
Assign hash patch 06142024
#76
athuyvo
closed
4 months ago
0
update rt file and new genomes
#75
athuyvo
closed
5 months ago
0
Delete bin/knee-plot_test.R
#74
athuyvo
closed
7 months ago
0
Update main.nf
#73
athuyvo
closed
7 months ago
0
add hash_ratio
#72
athuyvo
closed
7 months ago
0
Add hash v1
#71
athuyvo
closed
9 months ago
0
add random colors for wellcheck and umap plots
#70
athuyvo
closed
9 months ago
0
Update README.md
#69
ONeillMB1
closed
9 months ago
0
Merge master to addHash branch
#68
athuyvo
closed
11 months ago
0
Wellcheck.20230914.copy02
#67
athuyvo
closed
1 year ago
0
Drop scrublet_call
#66
ONeillMB1
closed
9 months ago
0
File permissions modifications.
#65
brgew
closed
1 year ago
0
Module mods.
#64
brgew
closed
1 year ago
0
Change permissions
#63
ONeillMB1
closed
9 months ago
0
output PCR duplication rate by PCR plate and overall in sample_stats
#62
eliza-barkan
opened
1 year ago
2
added mouse_davis genome, changed samtools index from bai to csi in m…
#61
athuyvo
closed
1 year ago
0
Fix module load order in nextflow.config.
#60
brgew
closed
1 year ago
0
Set dsl 1
#59
brgew
closed
2 years ago
0
Fix bedtools sort
#58
brgew
closed
2 years ago
0
Fix bedtools sort
#57
brgew
closed
2 years ago
0
Fix bed file sorting issue and add mouse_tdTomato genome.
#56
brgew
closed
2 years ago
0
Updated version number.
#55
brgew
closed
2 years ago
0
Gencode modes.20220713
#54
brgew
closed
2 years ago
0
Update docs until we upgrade to nextflow 2
#53
hpliner
opened
2 years ago
1
Upgrade to Nextflow 2
#52
hpliner
opened
2 years ago
0
Additions to pre-made monocle3 cds
#51
aishwaryagogate
opened
2 years ago
0
Nextflow 22.03+ Removed Operators used in sci-bbi
#50
acmullen-med
opened
2 years ago
0
Add info on reads per cell
#49
hpliner
opened
2 years ago
0
Add matplotlib/3.4.2 to run scrublet
#48
aishwaryagogate
closed
3 years ago
0
Add module six/1.15.0
#47
aishwaryagogate
closed
3 years ago
0
Add numpy/1.21.1 module
#46
aishwaryagogate
closed
3 years ago
1
Output PCR duplication rate of hashes
#45
atresen
opened
3 years ago
1
Incorporate hash counts into the CDS
#44
atresen
closed
3 months ago
0
Add a custom genome
#43
aishwaryagogate
closed
3 years ago
0
Find out hwat else is needed for hashing output
#42
hpliner
closed
3 months ago
1
Add sample sheet column for hashing or not
#41
hpliner
opened
3 years ago
0
Add hdf5/1.10.1 as a prereq for R
#40
aishwaryagogate
closed
3 years ago
0
Add cell totals info to all_sample_stats.csv
#39
aishwaryagogate
closed
9 months ago
1
Fix Nextflow version check.
#38
brgew
closed
3 years ago
0
Develop
#37
hpliner
closed
3 years ago
0
Commas branch
#36
lilu-martin
closed
3 years ago
0
add comments to check_sample_sheet.py
#35
brgew
closed
3 years ago
0
Add test for incorrect UTF encoding
#34
aishwaryagogate
closed
3 years ago
0
Gather info bug
#33
aishwaryagogate
closed
3 years ago
0
Gather info bug
#32
aishwaryagogate
closed
3 years ago
0
gather_info process bug
#31
aishwaryagogate
closed
3 years ago
0
Commas branch
#30
lilu-martin
closed
3 years ago
0
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