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bcgsc
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LINKS
⛓ Long Interval Nucleotide K-mer Scaffolder
GNU General Public License v3.0
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Meaning of gap size=1bp
#85
Johnsonzcode
closed
2 years ago
1
Process pipeline: Spawner process failed.
#84
Johnsonzcode
closed
2 years ago
2
Error
#83
123chenshixin
closed
2 years ago
1
Pipeline stuck after "Reading sequence reads"
#82
jzohren
closed
2 years ago
3
Output is different if the reads are split into two files
#81
TomHarrop
closed
2 years ago
2
v2.0.1
#65
MurathanGoktas
closed
2 years ago
0
Invalid format of "-s file-of-filenames"
#64
Hai1983
closed
2 years ago
5
How to creating input file : -f "sequences to scaffold" and -s "file-of-filenames"
#63
Hai1983
closed
2 years ago
2
about running error
#62
guanttttt
closed
2 years ago
1
MPET support broken in v2.0.0 ?
#61
pansapiens
closed
2 years ago
2
Add stalebot
#60
lcoombe
closed
2 years ago
1
Document incomplete make install target
#59
mmokrejs
closed
2 years ago
0
LINKS version 2.0 release
#58
MurathanGoktas
closed
2 years ago
16
Out of memory error
#57
cgy0627
closed
2 years ago
9
Links-Rails_Cobbler-Ntedit - Setup parameters
#56
AMMMachado
closed
3 years ago
5
Job killed even though I have enough RAM
#55
ViriatoII
closed
3 years ago
9
could not make scaffold using long reads
#54
bioramg
closed
3 years ago
2
parameter information
#53
LisaBlazek
closed
4 years ago
3
issues compiling BloomFilter
#52
LisaBlazek
closed
4 years ago
3
installation and usage help
#51
dunedice
closed
4 years ago
15
Invalid file of filenames: FULL_PATH -- fatal error
#50
tarunaaggarwal
closed
4 years ago
7
fof conversion failed
#49
bioramg
closed
4 years ago
2
System is not responding and Pairing issues
#48
bioramg
closed
4 years ago
2
No status and all
#47
bioramg
closed
4 years ago
0
Can't locate BloomFilter.pm in @inc
#46
bioramg
closed
4 years ago
0
BloomFilter_wrap.cxx:763:20: fatal error: EXTERN.h: No such file or directory
#45
bioramg
closed
4 years ago
10
Identifying the long read(s) that contig pair scaffolding is based upon
#44
ckeeling
closed
4 years ago
2
Very small contig parameters
#43
rajewski
closed
4 years ago
5
PacBio scaffolding no change. Any recommendations ?
#42
ptranvan
closed
4 years ago
8
AGP file creation : ARCS's gap mixed with pilon gap
#41
shameem356
closed
4 years ago
9
Shorten the unzip tar command
#40
vlad0x00
closed
4 years ago
0
Illumina contig scaffolding with PacBio reads
#39
hidvegin
closed
5 years ago
4
No scaffolding in the result.
#38
bbista
closed
4 years ago
5
No links using ONT
#37
bbista
closed
5 years ago
8
interpretation of output
#36
dcopetti
closed
4 years ago
3
Can't locate object method "new" via package "BloomFilter::BloomFilter" (perhaps you forgot to load "BloomFilter::BloomFilter"?)
#35
johnsolk
closed
4 years ago
10
LINKS segmentation error
#34
ewafula
closed
4 years ago
2
writeBloom.pl
#33
elor77
closed
5 years ago
6
LINKS finding no kmer pairs on 10X data
#32
enormandeau
closed
5 years ago
5
Unbundling bloomfilter out of the LINKS distribution tarball and more cleanup
#31
mmokrejs
closed
2 years ago
3
Does LINKs break pre-existing scaffolds?
#30
milw
closed
5 years ago
2
LINKS stuck at first contig
#29
sanjitsbatra
closed
5 years ago
1
Updated misc items in readme
#28
ccoulombe
closed
2 years ago
2
Make sure to use the Perl in env
#27
ccoulombe
closed
2 years ago
1
LINKS is not finding any kmer pairs in my ONT reads
#26
milw
closed
6 years ago
4
Output analysis confusion!
#25
veronneaupy
closed
6 years ago
3
ValueError invalid null reference in method 'insertSeq', argument 1 of type 'KmerBloomFilter &'
#24
SilviaHinojosa1983
closed
4 years ago
4
LINKS run terminated without any error message in the .log file, not getting output files
#23
drashutosh
closed
6 years ago
5
packaging in Anaconda - request/question
#22
devonorourke
closed
6 years ago
1
Attempt to free unreferenced scalar
#21
jdmontenegro
closed
5 years ago
3
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