Thanks for making this useful tool. I just finished running "reference-free pooled". I can see there are a lot of output under the subdirectory.
It looks like Each cell have 3 fa file. "transcripts.fa", "transcripts.nr.fa", "transcripts.short.fa". And the fa header seem to has their owner potential meaning here. May I ask is there any types of instructions/explaination about the output? And what do we need to do if we want to get a universal transcriptome reference sequence ( or next step)?
zhaocheng3326
commented
2 years ago
Hi,
Thanks for making this useful tool. I just finished running "reference-free pooled". I can see there are a lot of output under the subdirectory.
It looks like Each cell have 3 fa file. "transcripts.fa", "transcripts.nr.fa", "transcripts.short.fa". And the fa header seem to has their owner potential meaning here. May I ask is there any types of instructions/explaination about the output? And what do we need to do if we want to get a universal transcriptome reference sequence ( or next step)?
Thanks in advance.
Bests