Open kmnip opened 1 year ago
java -jar RNA-Bloom.jar -version
java -version
rnabloom -pool readslist.txt
If an input readslist file for the -pool option contains only single-end reads, stage 1 will still run to the end.
-pool
Technically, RNA-Bloom should exit with an error indicating "pooled assembly of single-end reads is not supported." I can also emphasize this (and explain why) in the readme section for -pool option: https://github.com/bcgsc/RNA-Bloom#file-format-for-the--pool-option
Please report
java -jar RNA-Bloom.jar -version
2.0.1java -version
20rnabloom -pool readslist.txt
If an input readslist file for the
-pool
option contains only single-end reads, stage 1 will still run to the end.Technically, RNA-Bloom should exit with an error indicating "pooled assembly of single-end reads is not supported." I can also emphasize this (and explain why) in the readme section for
-pool
option: https://github.com/bcgsc/RNA-Bloom#file-format-for-the--pool-option