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bcgsc
/
ntHash
Fast hash function for DNA/RNA sequences
http://bcgsc.github.io/ntHash/
MIT License
96
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13
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Fix doxygen issue
#50
ishmeals
opened
8 months ago
1
`update-docs.sh` not found or executable
#49
ishmeals
opened
9 months ago
0
Exposing Functions in kmer.cpp
#48
VeryAmazed
opened
11 months ago
0
Low-level optimizations and code refactor
#47
parham-k
closed
1 year ago
0
Refactor
#46
parham-k
closed
1 year ago
1
Example does not work
#45
marekkokot
closed
1 year ago
3
NtHash object and ntf64(seq, k) produce different forward hash values when k is a multiple of 4
#44
VeryAmazed
closed
1 year ago
1
missing cloning instructions and dependencies
#43
rica01
closed
1 year ago
1
Nthash2
#42
parham-k
closed
2 years ago
0
Unstable hash values for k>64
#41
shenwei356
closed
1 year ago
4
fix inconsistent canonical hash values for k%4==0
#40
yoshihikosuzuki
closed
2 years ago
1
Inconsistent canonical hash values between forward and revcomp sequences of the same k-mer when k % 4 == 0 (not in v2.1.0 but) in v2.2.0
#39
yoshihikosuzuki
closed
2 years ago
3
It seems that the list of parameters of the NTF64 function in the sample code does not match the source code
#38
yanlifeng
closed
2 years ago
3
Unarchive the repository to let community easily contribute to ntHash
#19
mohamadi
closed
2 years ago
4
nthash.hpp: faster ntBase via building with tetramer
#18
jwcodee
closed
4 years ago
4
Fix for spaced seed iterator
#17
johnlees
closed
4 years ago
4
release version 2.1.0
#16
jwcodee
closed
4 years ago
0
stHashIterator.hpp: add hash array description
#15
jwcodee
closed
4 years ago
0
stHashIterator enhancement
#14
jwcodee
closed
4 years ago
0
Add RNA functionality
#13
jwcodee
closed
4 years ago
0
Unit test
#12
jwcodee
closed
4 years ago
0
Set up CI with Azure Pipelines
#11
lcoombe
closed
4 years ago
0
Non-existing function used in README
#10
Lyannic
closed
4 years ago
1
AVX2 and AVX512 implementations for ntHash
#9
mirounga
opened
5 years ago
9
Create a native Python interface for ntHash
#8
sjackman
closed
2 years ago
7
ntHash is not matching the article description?
#7
luizirber
closed
6 years ago
19
Make ntHash iterator bidirectional
#6
JustinChu
closed
5 years ago
1
Multispaced seeds
#5
JustinChu
closed
2 years ago
6
Retrieve position in string
#4
JustinChu
closed
6 years ago
0
@param h number of hashes
#3
davisem
closed
7 years ago
1
Calls to omp timing functions when _OPENMP is not defined
#2
rsharris
closed
7 years ago
3
Problem in rol. Undefined for s=64, probably does work when s>64.
#1
rsharris
closed
7 years ago
11