Improvements to driver scripts for ntSynt

bcgsc / ntSynt

Detecting multi-genome synteny using minimizer graph mapping

GNU General Public License v3.0

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Closed lcoombe closed 9 months ago

lcoombe commented 9 months ago

Make ntSynt compatible with input fasta files not being in current working directory
- Will still output all files to the current working directory
Add check that input files exist
- Can print a clearer error message
Change some expand() in snakemake to f-strings
Update log messages, code comments
Update ntJoin submodule