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orca
:whale: Genomics Research Container Architecture
http://www.bcgsc.ca/services/orca
GNU General Public License v3.0
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BioBuilds vs ORCA (Missing software)
#4
Closed
tmozgach
closed
6 years ago
tmozgach
commented
7 years ago
[ ] ARAGORN (there is at brew)
[ ] bamkit
[ ] Barracuda
[ ] Bfast
[ ] Bioconductor
[ ] BreakDancer
[ ] chimerascan
[ ] conda
[ ] conifer
[ ] cutadapt
[ ] EBSEQ (Bioconductor)
[ ] GCTA
[ ] GenomonFisher
[ ] Graphviz (there is at brew)
[ ] iSAAC
[ ] LoFreq*
[ ] mrsFAST
[ ] NovelSeq
[ ] Parasight
[ ] Pindel
[ ] PLINK-NG (there is at brew)
[ ] Primer3 (there is at brew)
[ ] R cowplot
[ ] R tidyverse
[ ] RSEM
[ ] scalpel
[ ] scikit-bio
[ ] Snippy
[ ] SnpSift
[ ] SOAP3-DP
[ ] SOAPaligner
[ ] SOAPbuilder
[ ] SplazerS
[ ] STAR (there is at brew)
[ ] STAR-fusion
[ ] T-Coffee (there is at brew)
[x] tabix (there is at homebrew/boneyard)
[ ] tassel
[ ] TMAP
[ ] variant_tools
sjackman
commented
7 years ago
The executable
tabix
is provided by
htslib
now.