bcgsc / pori_graphkb_loader

The Loaders for GraphKB. Imports content from external sources via the GraphKB REST API
https://bcgsc.github.io/pori
GNU General Public License v3.0
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Issue with json-cycle package #124

Open creisle opened 1 year ago

creisle commented 1 year ago

we had a user email with the following issue

The main repo could be installed without issue and works well. However, when installing the dependencies for pori_graphkb_loader, the json-cycle package couldn't be installed; I suspect that the package hasn't been maintained and has become outdated since your paper's publication.

Could you take a look? I have directed the user to the docker container, however we should still see if this can be reproduced and if we need to make changes to the loader etc dependencies. I think that json package is used in the API as well

elewis2 commented 1 year ago

we had a user email with the following issue

Could you put us in touch with user by any chance?

mathieulemieux commented 1 year ago

I tried to reproduce the issue with no success:

All packages installed; 8 moderate severity vulnerabilities

mathieulemieux commented 1 year ago

JIRA ticket https://www.bcgsc.ca/jira/browse/KBDEV-1068 on hold until user feedback.