Release/v7.0.0

[sshugsc]

Breaking Changes

• [KBDEV-1158] - clinicaltrial loader now uses api upload instead of file
• [KBDEV-1167] - cancergenomeinterpreter now uses biomarkers file instead of biomarker_per_variant
• [KBDEV-1135] - ncit loader updated to use latest file
• [KBDEV-1139] - ensembl loader updated to use latest file with proteins

New Features

• all_source: New loader to upload all sources

BugFixes

• Snakefile: Fix loading errors
• [KBDEV-1050] - docm: Remap some statements to "recurrent" relevance term
• [KBDEV-1086] - vocabulary ontology data: Link "copy variant" to "mutation" instead of "structural variant"
• ncit: Use preferredName to handle the drugs with different id but the same name
• moa: Handle empty string

Improvements

• [KBDEV-957] - sources: Add ESMO, tso500 and Profile as source
• [KBDEV-1120] - evidenceLevels ontology data: Add more Profile evidenceLevels
• [KBDEV-1084] - vocabulary ontology data: Add "cancer gene"
• Snakefile: Add all_local and all_ontologies

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Unit Test Results

0 files  ±0  0 suites  ±0   0s :stopwatch: ±0s 0 tests ±0  0 :heavy_check_mark: ±0  0 :zzz: ±0  0 :x: ±0 

Results for commit e03b77d0. ± Comparison against base commit 98d7797f.

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Unit Test Results

0 files  ±0  0 suites  ±0   0s :stopwatch: ±0s 0 tests ±0  0 :heavy_check_mark: ±0  0 :zzz: ±0  0 :x: ±0 

Results for commit 316a1fcd. ± Comparison against base commit 98d7797f.

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Unit Test Results

0 files  ±0  0 suites  ±0   0s :stopwatch: ±0s 0 tests ±0  0 :heavy_check_mark: ±0  0 :zzz: ±0  0 :x: ±0 

Results for commit f8d1b6fa. ± Comparison against base commit 98d7797f.

[github-actions[bot]]

Unit Test Results

0 files  ±0  0 suites  ±0   0s :stopwatch: ±0s 0 tests ±0  0 :heavy_check_mark: ±0  0 :zzz: ±0  0 :x: ±0 

Results for commit f8d1b6fa. ± Comparison against base commit 98d7797f.