If span=auto used with ntLink mappings, throw error

bcgsc / tigmint

⛓ Correct misassemblies using linked AND long reads

https://bcgsc.github.io/tigmint/

GNU General Public License v3.0

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Closed lcoombe closed 1 year ago

lcoombe commented 1 year ago

Currently, span=auto is not compatible with using ntLink for mappings
If these options are specified together, throw an error which describes the issue and makes a suggestion for improvement