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bcgsc / tr_catalog

Tandem repeat catalog from public long-read sequence assemblies
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ModuleNotFoundError: No module named 'graph' #3

Closed jawad9-11 closed 20 hours ago

jawad9-11 commented 1 day ago

Hi, I want to ask is the graph external soruce because i cant find it.

(samtool) [jawad@login04 santizied]$ python combine_haps.py -h Traceback (most recent call last): File "/work/home/jawad/1KGP_cram/project/assembly_data/santizied/combine_haps.py", line 9, in from graph import Graph ModuleNotFoundError: No module named 'graph' as you mentioned in the paper to create edges in undirected graph. Can you explain?

readmanchiu commented 1 day ago

sorry about this, and thanks for spotting this, I just added my graph module to the repo.