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bcgsc / transabyss

de novo assembly of RNA-seq data using ABySS
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ABySS 2.0.2 #9

Closed mspiffy closed 6 years ago

mspiffy commented 6 years ago

We are getting later run-errors with ABYSS 2.0.2 in conjunction with Trans-ABySS, which is basically a known issue. https://github.com/bcgsc/abyss/issues/159

reads containing non-ACGT characters make: *** No rule to make target 'transabyss-1.adj'. Stop.

If there is anything to instrument this on the pipelines used for debugging, would be happy to help.

kmnip commented 6 years ago

I will be releasing a version 2 of Trans-ABySS that is compatible with ABySS v2.0.x

kmnip commented 6 years ago

Trans-ABySS 2.0.0 is released. I am closing this issue now. Please let us know if you see anymore issues.

Thanks, Ka Ming