There are at least two known items causing issues when getting deleted. The atmosphere deletes Satellites and Particles from the old particle system, one of these appears to be the cause of the current issue.
However the class _AndOrBase in GUI_Objects.h is also not working right and should probably just be removed. This class allows some simple logic to be embedded using pointers to other objects, those pointers are causing problems.
There are at least two known items causing issues when getting deleted. The atmosphere deletes Satellites and Particles from the old particle system, one of these appears to be the cause of the current issue.
However the class _AndOrBase in GUI_Objects.h is also not working right and should probably just be removed. This class allows some simple logic to be embedded using pointers to other objects, those pointers are causing problems.