Closed PharmCat closed 7 months ago
I have error from code
cat_mm = fit(LinearMixedModel, @formula(CAT_SCORE~0+Vizit+HTPuse+AGE+SEX+PACK_YEARS+NATION+DIS_LUNG+MARITAL_STATUS+Vizit*HTPuse+(1|CODE_CAT)), ds_work_cat, REML = true, contrasts = Dict(:Vizit => StatsModels.DummyCoding(base = "V02"), :HTPuse => StatsModels.DummyCoding(base = "CC"), :NATION => StatsModels.DummyCoding(base = "Азиатская"), :SEX => StatsModels.DummyCoding(base = "мужской"), :DIS_LUNG => StatsModels.DummyCoding(base = "нет"), :MARITAL_STATUS => StatsModels.DummyCoding(base = "Нет")) ) empairs(cat_mm)
Error msg:
ERROR: MethodError: Cannot `convert` an object of type String7 to an object of type Union{Number, String} Closest candidates are: convert(::Type{S}, ::CategoricalValue) where S<:Union{AbstractChar, AbstractString, Number} at C:\Users\a\.julia\packages\CategoricalArrays\0yLZN\src\value.jl:92 convert(::Type{T}, ::T) where T at Base.jl:61 Stacktrace: [1] setindex!(h::Dict{String, Union{Number, String}}, v0::String7, key::String) @ Base .\dict.jl:382 [2] (::Effects.var"#24#26"{String, String, DataFrame, Vector{String}})(::Vector{DataFrameRow{DataFrame, DataFrames.Index}}) @ Effects C:\Users\a\.julia\packages\Effects\eXakY\src\emmeans.jl:149 [3] MappingRF (repeats 2 times) @ .\reduce.jl:95 [inlined] [4] _foldl_impl(op::Base.MappingRF{Combinatorics.var"#10#13"{Combinatorics.var"#reorder#11"{DataFrames.DataFrameRows{DataFrame}}}, Base.MappingRF{Effects.var"#24#26"{String, String, DataFrame, Vector{String}}, Base.BottomRF{typeof(vcat)}}}, init::Base._InitialValue, itr::Combinatorics.Combinations) @ Base .\reduce.jl:58 [5] foldl_impl @ .\reduce.jl:48 [inlined] [6] mapfoldl_impl @ .\reduce.jl:44 [inlined] [7] #mapfoldl#259 @ .\reduce.jl:170 [inlined] [8] mapfoldl @ .\reduce.jl:170 [inlined] [9] #mapreduce#263 @ .\reduce.jl:302 [inlined] [10] mapreduce @ .\reduce.jl:302 [inlined] [11] empairs(df::DataFrame; eff_col::String, err_col::Symbol, padjust::Function) @ Effects C:\Users\a\.julia\packages\Effects\eXakY\src\emmeans.jl:142 [12] empairs(model::LinearMixedModel{Float64}; eff_col::Nothing, err_col::Symbol, invlink::Function, levels::Dict{Any, Any}, dof::Nothing, padjust::Function) @ Effects C:\Users\a\.julia\packages\Effects\eXakY\src\emmeans.jl:128 [13] empairs(model::LinearMixedModel{Float64}) @ Effects C:\Users\a\.julia\packages\Effects\eXakY\src\emmeans.jl:124 [14] top-level scope @ REPL[33]:1
my data types:
I got the same error.
A stopgap fix would be to convert the relevant column to String. I'll also check whether we have an unnecessarily strict type restriction in the code.
String
I have error from code
Error msg:
my data types: