There is a workflow for registration of mass spectrometry image data (MALDI) and histology images: https://usegalaxy.eu/published/workflow?id=64bb7a64877034dc This interdisciplinary analysis serves the combined quantification of MALDI and histological microscopy images.
However, there might be a newer version of the workflow, maybe even on IWC! Melanie Föll mentioned, that she was considering submitting a revised version.
Given the paper, writing the tutorial should be kind of straight-forward.
Things to be done:
[ ] Check whether we have data suitable for this workflow? Preferably, use the data from the paper.
[ ] Determine which version of the workflow is best suited for a tutorial? This would probably be the one on IWC, if there is one by now. It might be helpful to talk to Melanie Föll.
[ ] Write the tutorial which covers the reproduction and usage of the workflow.
There is a workflow for registration of mass spectrometry image data (MALDI) and histology images: https://usegalaxy.eu/published/workflow?id=64bb7a64877034dc This interdisciplinary analysis serves the combined quantification of MALDI and histological microscopy images.
However, there might be a newer version of the workflow, maybe even on IWC! Melanie Föll mentioned, that she was considering submitting a revised version.
And there is also a paper about it: Föll et al., GigaScience 2019
Given the paper, writing the tutorial should be kind of straight-forward.
Things to be done: