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becavin-lab / checkatlas

One liner tool to check the quality of your single-cell atlases.
https://checkatlas.readthedocs.io/en/latest/
BSD 3-Clause "New" or "Revised" License
3 stars 1 forks source link

Workflow #33

Closed drbecavin closed 1 year ago

drbecavin commented 1 year ago

Summary :memo:

Add checkatlas worklfow management using nextflow

Details

Describe more what you did on changes.

  1. Add nbextflow in dependencies
  2. Add nextflow parameter
  3. Add checkatlas-workflow entry point to run specific parts of checkatlas
  4. Create checkatlas-workflow nextflow file
  5. Fix nextflow workflow

Bugfixes :bug: (delete if dind't have any)

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