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bede / hostile

Precise host read removal

MIT License

78 stars 4 forks source link

Closed bede closed 1 year ago

bede commented 1 year ago

Notes

mm2 supports either .mmi, or .fasta with or without compression
bt2 requires a prebuilt index (takes forever) split across numerous files, specified as a path without an extension

bede commented 1 year ago

Done, needs documentation however as behaviour is not totally intuitive