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beelabhmc / flower_map

Automated flower species classification for generating honey-bee foraging maps
MIT License
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create script for figuring out which images a segment belongs to #16

Closed aryarm closed 3 years ago

tommyfuu commented 3 years ago

Hi Arya! Thanks for writing the codes for extracting source pictures from segment labels! So to run the scripts, we just do qsub images-with-segment.bash?

aryarm commented 3 years ago

Ah! I think the script is basic enough that it probably won't be necessary to execute it using qsub. Here's an example of how you might execute it (from /mnt/biology/donaldson/tom/flower_map/) for that segment you mentioned in Slack: https://github.com/beelabhmc/flower_map/blob/222fad651ddf341ced8b05f06bf8d0ab7ba8ea99/scripts/images_with_segment.bash#L7

tommyfuu commented 3 years ago

Right

Ah! I think the script is basic enough that it probably won't be necessary to execute it using qsub. Here's an example of how you might execute it (from /mnt/biology/donaldson/tom/flower_map/) for that segment you mentioned in Slack: https://github.com/beelabhmc/flower_map/blob/222fad651ddf341ced8b05f06bf8d0ab7ba8ea99/scripts/images_with_segment.bash#L7

Right! Ok I will go ahead and merge it. Thanks!