belbio / bel_resources

BEL resources and tools for namespaces, annotations, orthologs, taxonomy, etc and tool
https://bel-resources.rtfd.io
Apache License 2.0
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Taxonomy tree for search #5

Open wshayes opened 6 years ago

wshayes commented 6 years ago

Evaluate whether it would be useful to search for suggestions of protein terms in mammalian organisms versus a specific organism.

This would be done by adding a taxonomy_tree array to terms/taxonomy.py output and loading the tax_id and taxonomy_tree for each gene terms set in order to allow for searches of higher levels of the taxonomy tree.

To do this need to update terms/taxonomy.py output and potentially create a separate output file of tax_id and taxonomy_tree of tax_id parents in the tree. Also, need to update search mapping for completions and update each terms/.py file to use the taxonomy_tree array.