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beltrame / mmMRI

Multi Modal MRI
BSD 3-Clause "New" or "Revised" License
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as a user i want to be able to click with a mouse to trace a mask on the brain #24

Closed cesine closed 10 years ago

cesine commented 10 years ago

Depends on being able to import and export nifti #23

cesine commented 10 years ago

@beltrame here is a sample mouse mask trace which you can use in your pipeline: 

{
  "label": "two",
  "vector": [
    {
      "modelID": "dbs.json",
      "shapeID": "dbs.json_46",
      "nearestVertex": 10558,
      "point": {
        "x": 9.280448718,
        "y": 1.403390932,
        "z": 8.716666667
      }
    },
    {
      "modelID": "dbs.json",
      "shapeID": "dbs.json_46",
      "nearestVertex": 10544,
      "point": {
        "x": 9.280448718,
        "y": 1.417713232,
        "z": 6.207407407
      }
    },
    {
      "modelID": "dbs.json",
      "shapeID": "dbs.json_46",
      "nearestVertex": 10544,
      "point": {
        "x": 9.280448718,
        "y": 1.417713232,
        "z": 6.207407407
      }
    },
    {
      "modelID": "dbs.json",
      "shapeID": "dbs.json_46",
      "nearestVertex": 10544,
      "point": {
        "x": 9.280448718,
        "y": 1.417713232,
        "z": 6.207407407
      }
    },
    {
      "modelID": "dbs.json",
      "shapeID": "dbs.json_46",
      "nearestVertex": 10544,
      "point": {
        "x": 9.280448718,
        "y": 1.417713232,
        "z": 6.207407407
      }
    },
    {
      "modelID": "dbs.json",
      "shapeID": "dbs.json_46",
      "nearestVertex": 10558,
      "point": {
        "x": 9.280448718,
        "y": 1.403390932,
        "z": 8.716666667
      }
    },
    {
      "modelID": "dbs.json",
      "shapeID": "dbs.json_46",
      "nearestVertex": 10558,
      "point": {
        "x": 9.280448718,
        "y": 1.403390932,
        "z": 8.716666667
      }
    }
  ]
}

in this screenshot you can see where to get it out of the user interface for debugging: screen shot 2014-10-19 at 1 43 04 pm