Open jinyuanchun opened 9 months ago
After I installed, there was an error。How to handle it?
import sys sys.path.append('/hsfscqjf2/ST_CQ/Reference/software/envs/clustree/lib/python3.9/site-packages/') from clustree import clustree
error:
TypeError Traceback (most recent call last) Cell In[10], line 4 1 import sys 2 sys.path.append('/hsfscqjf2/ST_CQ/Reference/software/envs/clustree/lib/python3.9/site-packages/') ----> 4 from clustree import clustree File /hsfscqjf2/ST_CQ/Reference/software/envs/clustree/lib/python3.9/site-packages/clustree/__init__.py:1 ----> 1 from clustree._graph import clustree 3 __all__ = [ 4 "clustree", 5 ] File /hsfscqjf2/ST_CQ/Reference/software/envs/clustree/lib/python3.9/site-packages/clustree/_graph.py:5 1 from typing import Optional 3 from networkx import DiGraph ----> 5 from clustree._clustree_typing import ( 6 CMAP_TYPE, 7 COLOR_AGG_TYPE, 8 DATA_INPUT_TYPE, 9 EDGE_COLOR_TYPE, 10 IMAGE_INPUT_TYPE, 11 MIN_CLUSTER_NUMBER_TYPE, 12 NODE_COLOR_TYPE, 13 ORIENTATION_INPUT_TYPE, 14 OUTPUT_PATH_TYPE, 15 ) 16 from clustree._config import ClustreeConfig 17 from clustree._draw import draw_clustree File /hsfscqjf2/ST_CQ/Reference/software/envs/clustree/lib/python3.9/site-packages/clustree/_clustree_typing.py:11 5 import pandas as pd 7 OUTPUT_PATH_TYPE = Optional[Union[str, Path]] 9 NODE_CONFIG_TYPE = [ 10 int, # (K, k) hashed ---> 11 dict[str, Any], # 'color': XYZ, 'samples': 75, 'image': np.array 12 ] 14 EDGE_CONFIG_TYPE = [ 15 int, # (K, k_start, k_end) hashed 16 dict[str, Any], # 'color', 'samples', 'alpha', 'start', 'end', 'res' 17 ] 19 DATA_INPUT_TYPE = Union[str, Path, pd.DataFrame] TypeError: 'type' object is not subscriptable
After I installed, there was an error。How to handle it?
error: