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ben-silke / biol3209

This repo contains the code for the undertaking of the biol3209 subject.
BSD 3-Clause "New" or "Revised" License
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Database creation #15

Closed ben-silke closed 2 years ago

ben-silke commented 2 years ago

need to create a base with the genes for

  1. Soil microbiome
  2. gut microbiome
  3. ?? other if the first two are not sufficient
ben-silke commented 2 years ago

selection of an ORM

  1. bespoke; pros; lightweight, easy to target; cons; more code
  2. django ORM; cons; doesn't seem like the right use case, less lightweight, need to create django models; pros; very comfortable with
  3. sqlAlchemy: pros: ?? cons: need to learn it
ben-silke commented 2 years ago

django setup The benefit here is also that it could be quickly transformed to a webserver

ben-silke commented 2 years ago

if with any database;

Set up; create data script. This will be able to read in the files and populate the database.

ben-silke commented 2 years ago

gone with django