Add 'degree' penalty to scoring algorithm

bending456 / Macrophage

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Add 'degree' penalty to scoring algorithm #1

Open huskeypm opened 3 years ago

huskeypm commented 3 years ago

Adjust score to reflect the adjacency of two proteins connected by an edge (in some cases we connect two proteins that are actually linked via one or more intermediary proteins). See David's annotations for detail.

huskeypm commented 3 years ago

This should actually belong to the Pathway analysis code