json file reading

[DinoBenevento]

Dear benedekrozemberczki, I’m a student in Computer Science, from the University of Salerno. I’m dealing with your graph2vec implementation after reading the related article, which I found very interesting. When trying to run your code, I find a little bug. Here below you can find the error and my fix. parser.add_argument("--input-path", nargs="?", default="../dataset", help="Input folder with jsons.")

parser.add_argument("--output-path", nargs="?", default="../features/nci2.csv", help="Embeddings path.") at line 111 of the script graph2vec, the variable global was empty, so without the json files of the dataset folder. graphs = glob.glob(args.input_path + "*.json")

I rewrite the code in this way to extract the files into the directory:

graphs = [] pathfilename = args.input_path for files in os.listdir(pathfilename): graphs.append(pathfilename + '/' + files)

Hope this will help you :D Given Graph2vec will be a main part of my thesis, don’t you mind if I contact you in case of difficulties?

Kind regards, Gerardo "Dino" Benevento

[benedekrozemberczki]

Hi there Dino,

Are you a windows user?

This package includes a range of Graph2Vec like methods:

https://github.com/benedekrozemberczki/karateclub

Bests,

Benedek

On Mon, 3 Feb 2020 at 20:50, DinoBenevento notifications@github.com wrote:

Dear benedekrozemberczki, I’m a student in Computer Science, from the University of Salerno. I’m dealing with your graph2vec implementation after reading the related article, which I found very interesting. When trying to run your code, I find a little bug. Here below you can find the error and my fix. parser.add_argument("--input-path", nargs="?", default="../dataset", help="Input folder with jsons.")

parser.add_argument("--output-path", nargs="?", default="../features/nci2.csv", help="Embeddings path.") at line 111 of the script graph2vec, the variable global was empty, so without the json files of the dataset folder. graphs = glob.glob(args.input_path + "*.json")

I rewrite the code in this way to extract the files into the directory:

graphs = [] pathfilename = args.input_path for files in os.listdir(pathfilename): graphs.append(pathfilename + '/' + files)

Hope this will help you :D Given Graph2vec will be a main part of my thesis, don’t you mind if I contact you in case of difficulties?

Kind regards, Gerardo "Dino" Benevento

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[benedekrozemberczki]

Would you reply?

[benedekrozemberczki]

Okay. Let us close this for now.