numpy version error

[wyfSunflower]

PS D:\workspace\triangleCountAndLPA\karateclub\examples\whole_graph_embedding> python .\graph2vec_example.py
RuntimeError: module compiled against API version 0x10 but this version of numpy is 0xf

[LucaCappelletti94]

Please, provide more information, such as:

• Your Python version
• Your Numpy version
• What is your OS

[wyfSunflower]

thanks for your reply Python 3.11.4 numpy 1.22.4 Windows 11 home edition x64

[wyfSunflower]

By the way,I was failed to install this library on ubuntu 22.04.2 LTS with Python 3.10.6: root@DESKTOP-M5G7V2R:/home/gml/triangleCnt/demo# pip3 install karateclub Collecting karateclub Using cached karateclub-1.3.3.tar.gz (64 kB) Preparing metadata (setup.py) ... error error: subprocess-exited-with-error

× python setup.py egg_info did not run successfully. │ exit code: 1 ╰─> [43 lines of output] /usr/local/lib/python3.10/dist-packages/setuptools/init.py:85: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try pip install --use-pep517. dist.fetch_build_eggs(dist.setup_requires)

          It is possible a package already installed in your system
          contains an version that is invalid according to PEP 440.
          You can try `pip install --use-pep517` as a workaround for this problem,
          or rely on a new virtual environment.

          If the problem refers to a package that is not installed yet,
          please contact that package's maintainers or distributors.

  Traceback (most recent call last):
    File "<string>", line 2, in <module>
    File "<pip-setuptools-caller>", line 34, in <module>
    File "/tmp/pip-install-rs94y0vc/karateclub_b960d6ff21ee4fd7bb85756fddec4b5c/setup.py", line 46, in <module>
      setup(
    File "/usr/local/lib/python3.10/dist-packages/setuptools/__init__.py", line 107, in setup
      _install_setup_requires(attrs)
    File "/usr/local/lib/python3.10/dist-packages/setuptools/__init__.py", line 80, in _install_setup_requires
      _fetch_build_eggs(dist)
    File "/usr/local/lib/python3.10/dist-packages/setuptools/__init__.py", line 85, in _fetch_build_eggs
      dist.fetch_build_eggs(dist.setup_requires)
    File "/usr/local/lib/python3.10/dist-packages/setuptools/dist.py", line 894, in fetch_build_eggs
      return _fetch_build_eggs(self, requires)
    File "/usr/local/lib/python3.10/dist-packages/setuptools/installer.py", line 39, in _fetch_build_eggs
      resolved_dists = pkg_resources.working_set.resolve(
    File "/usr/local/lib/python3.10/dist-packages/pkg_resources/__init__.py", line 815, in resolve
      dist = self._resolve_dist(
    File "/usr/local/lib/python3.10/dist-packages/pkg_resources/__init__.py", line 844, in _resolve_dist
      env = Environment(self.entries)
    File "/usr/local/lib/python3.10/dist-packages/pkg_resources/__init__.py", line 1044, in __init__
      self.scan(search_path)
    File "/usr/local/lib/python3.10/dist-packages/pkg_resources/__init__.py", line 1077, in scan
      self.add(dist)
    File "/usr/local/lib/python3.10/dist-packages/pkg_resources/__init__.py", line 1096, in add
      dists.sort(key=operator.attrgetter('hashcmp'), reverse=True)
    File "/usr/local/lib/python3.10/dist-packages/pkg_resources/__init__.py", line 2640, in hashcmp
      self.parsed_version,
    File "/usr/local/lib/python3.10/dist-packages/pkg_resources/__init__.py", line 2694, in parsed_version
      raise packaging.version.InvalidVersion(f"{str(ex)} {info}") from None
  pkg_resources.extern.packaging.version.InvalidVersion: Invalid version: '1.1build1' (package: distro-info)
  [end of output]

note: This error originates from a subprocess, and is likely not a problem with pip. error: metadata-generation-failed

× Encountered error while generating package metadata. ╰─> See above for output.

note: This is an issue with the package mentioned above, not pip. hint: See above for details.

[LucaCappelletti94]

Hi @wyfSunflower, could you please comment how you resolved the issue?

[wyfSunflower]

Not solved, failed to install on ubuntu;installed on win11 but run error with numpy version

[LucaCappelletti94]

Please refrain from closing this issue if it has not yet been resolved, otherwise, it might never be.

[ardaeerol]

relevant issue:

Building wheels for collected packages: numpy, pandas Building wheel for numpy (pyproject.toml): started Building wheel for numpy (pyproject.toml): finished with status 'error' Building wheel for pandas (pyproject.toml): started Building wheel for pandas (pyproject.toml): finished with status 'error' Failed to build numpy pandas Note: you may need to restart the kernel to use updated packages. error: subprocess-exited-with-error

Building wheel for numpy (pyproject.toml) did not run successfully. exit code: 1

[202 lines of output] setup.py:66: RuntimeWarning: NumPy 1.22.4 may not yet support Python 3.11. warnings.warn( Running from numpy source directory. Processing numpy/random_bounded_integers.pxd.in Processing numpy/random\bit_generator.pyx Processing numpy/random\mtrand.pyx ..... note: This error originates from a subprocess, and is likely not a problem with pip. ERROR: Failed building wheel for pandas ERROR: Could not build wheels for numpy, pandas, which is required to install pyproject.toml-based projects

python version = 3.11.6 numpy version = 1.26.1 OS = Windows 10 Pro x64

can not even install karateclub..

I tried to install in 2 different PCs, both of them have Windows OS.

[LucaCappelletti94]

Can you install numpy and pandas separately? Like, does the following fail?

pip install pandas numpy -U

[ardaeerol]

did not work, then I used python 3.10.11 venv and now able to install karateclub. Thanks for reply @LucaCappelletti94

[LucaCappelletti94]

Ok so it seems like we can close as not a KarateClub problem but a pandas/numpy installation problem on Windows, correct?

[notprg]

Still having the same issue on ubuntu... Someone solved it?

[LucaCappelletti94]

Have you already done as suggested above and pip install pandas numpy -U ?

[LucaCappelletti94]

did not work, then I used python 3.10.11 venv and now able to install karateclub

This specifically, @notprg