--maxThreads? - Githubissues

benedictpaten / marginAlign

UCSC Nanopore

MIT License

42 stars 13 forks source link

Open conchoecia opened 7 years ago

conchoecia commented 7 years ago

Hello,

I am running marginAlign and used --maxThreads 90, however the process lastal is only using one thread. Is this normal?

What parts of marginAlign are parallelized, and is the = necessary between --maxThreads and the argument?

Thanks!

mitenjain commented 7 years ago

Hello,

I am working on a fix to parallelize BWA and LAST within the framework. This fix should be pushed shortly.

Sorry for the hassle. -Miten