need to add VCF output to marginCaller

benedictpaten / marginAlign

UCSC Nanopore

MIT License

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need to add VCF output to marginCaller #3

Closed benedictpaten closed 9 years ago

benedictpaten commented 9 years ago

In line 87 of marginCallerLib.py you'll see where we want to write out a VCF file of the SNV calls. Please add this output (there is some other missing stuff, but I can get that done over the weekend).

mitenjain commented 9 years ago

VCF writer functional now. More changes as need arises.