benjaminsaljooghi / prospector

High-performance CRISPR-Cas discovery.
BSD 3-Clause "New" or "Revised" License
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Content erasure offset problem potential #80

Open benjaminsaljooghi opened 3 years ago

benjaminsaljooghi commented 3 years ago

May get a potential bug where your genome indices are off due to the erasure. If you see any cartography examples where you detected all the right things but you were offset by a little bit, then it's probably because of the content erasure in load_genome / parse_fasta.

In fact, this problem may already be the case but nefariously small due to the small amount of content erasure. Hard to say, but not a problem for now until I see something obvious