bensutherland / eDNA_metabarcoding

Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)
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The solution using 'unidentified' results in the need for an extra subsequent script #5

Open bensutherland opened 6 years ago

bensutherland commented 6 years ago

Can we re-name the 'unidentified' files to not require a subsequent different script for after the '02_ngsfilter_SE_exp_unident.sh', that is, can we somehow make only a single obiannotate.sh script? Currently there are two: obiannotate_unident.sh and obiannotate_ident.sh.