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bergmanlab
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TELR
TELR is a fast non-reference transposable element detector from long read sequencing data.
https://github.com/bergmanlab/TELR
BSD 2-Clause "Simplified" License
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Add flye
#10
Closed
shunhuahan
closed
2 years ago
shunhuahan
commented
2 years ago
Users can now:
Choose ngmlr or minimap2 as raw reads to reference aligner using
--aligner
option.
Choose wtdbg2 or flye as local contig assembler using
--assembler
option.
Choose wtdbg2 or flye as local contig polisher using
--polisher
option.
Choose number of iterations for local contig polishing using
-p/--polish_iterations
option.
--aligner
option.--assembler
option.--polisher
option.-p/--polish_iterations
option.