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berkeleybop / bbop-manager-golr

Manager for handling communication and callbacks with GOlr instances.
BSD 3-Clause "New" or "Revised" License
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Undefined field isa_closure #9

Closed tmushayahama closed 6 years ago

tmushayahama commented 6 years ago

@kltm I dont know if this is an amigo issue (it works outside manager builder).

Adding a query filter of isa_closure gives an undefined field error

Using manager.add_query_filter('isa_closure', 'CHEBI:33695');

There is a closure called isa_partof_closure, is that the same?

image

And the query string parameters

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kltm commented 6 years ago

Until there is a public index that includes the isa_closure, pinning to that field will not work.

kltm commented 6 years ago

To clarify that a bit more, the code is already in place for this in AmiGO 2.5, but that needs to be released and have it's indices built for it, which is pending the transfer of the AmiGO production site from Stanford to Berkeley. There is no code or process change that can happen in the code base in this abstract library's repo.