berman-lab / ymap

YMAP - Yeast Mapping Analysis Pipeline : An online pipeline for the analysis of yeast genomic datasets.
MIT License
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Write out stderr of all tools to a log #44

Open vladimirg opened 8 years ago

vladimirg commented 8 years ago

Some scripts write their errors to a log, but many do not, and in some cases incorrect exception handling can prevent the log writing altogether. An easy solution is to redirect stderr to a log (either the existing one or a special one) at the end of each tool and script call, so that all stderr errors are captured.