Feature request: Extend `variant-linker` to support input and output in VCF (Variant Call Format) files. - Githubissues

berntpopp / variant-linker

MIT License

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Feature request: Extend `variant-linker` to support input and output in VCF (Variant Call Format) files. #2

Open berntpopp opened 3 months ago

berntpopp commented 3 months ago

Proposed Solution

Modify the application to accept VCF files as input, in addition to the current input methods.
Implement functionality to parse VCF files and extract variant data.
Extend the output generation to include the option of exporting results in VCF format.

Acceptance Criteria

[ ] Input support for VCF files is added.
[ ] Output can be generated in VCF format.
[ ] Proper parsing and handling of VCF file format.
[ ] Comprehensive tests to ensure compatibility and correctness.