Changes main workflow to saves metric reports created by the mark duplicate step into a new output directory named metrics-markduplicates. Changes preprocessing workflow to save the metric reports as well. Before this change the mark duplicate metric reports were being generated but discarded.
Changes main workflow to saves metric reports created by the mark duplicate step into a new output directory named
metrics-markduplicates
. Changes preprocessing workflow to save the metric reports as well. Before this change the mark duplicate metric reports were being generated but discarded.Fixes #16