DIrect link to reference collections?

bfosso / MetaShot

MetaShot (Metagenomics Shotgun) is a complete pipeline designed for the taxonomic classification of the human microbiota members. In MetaShot, third party tools and new developed Python and Bash scripts are integrated to analyze paired-end (PE) Illumina sequences, offering an automated procedure covering all the analysis steps from raw data management to taxonomic profiling. It is designed to analyze both DNA-Seq and RNA-Seq data.

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DIrect link to reference collections? #6

Closed transcript closed 6 years ago

transcript commented 6 years ago

Hello,

For the reference collections download, there doesn't seem to be a direct file path, which means it can't be downloaded using wget. The "direct link" is just https://recascloud.ba.infn.it/index.php/s/9dFFTJUr0bOU2mN/download, which isn't the file itself.

Is there a direct path?

bfosso commented 6 years ago

Please type:

wget --no-check-certificate https://recascloud.ba.infn.it/index.php/s/9dFFTJUr0bOU2mN/download

It will generate a file called download of approximately 49 Gb. Following type:

tar -xvfz dowload