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bfosso / MetaShot

MetaShot (Metagenomics Shotgun) is a complete pipeline designed for the taxonomic classification of the human microbiota members. In MetaShot, third party tools and new developed Python and Bash scripts are integrated to analyze paired-end (PE) Illumina sequences, offering an automated procedure covering all the analysis steps from raw data management to taxonomic profiling. It is designed to analyze both DNA-Seq and RNA-Seq data.
GNU General Public License v3.0
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MetaShot not multi-threaded #8

Closed lmanchon closed 5 years ago

lmanchon commented 5 years ago

MetaShot_Master_script.py doesn't accept -t parameter to set number of threads to use !

bfosso commented 5 years ago

Actually, that option has been suppressed. I've modified accordingly the script