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bgruening / docker-galaxy

:whale::bar_chart::books: Docker Images tracking the stable Galaxy releases.
http://bgruening.github.io/docker-galaxy
MIT License
226 stars 134 forks source link

unable to start container #604

Closed GuilhemSempere closed 3 days ago

GuilhemSempere commented 1 year ago

I cloned the repo, and launched the following command (found in the documentation) from within the "compose" directory:

SLURM_NODE_COUNT=3 docker-compose -f docker-compose.yml -f docker-compose.slurm.yml up --scale slurm_node=3

... deployment remains stuck with message "Collecting package metadata (current_repodata.json): ...working..."

I tried to investigate and it looks like the faulty command is

conda install virtualenv pip ephemeris

Please help ;-)

bgruening commented 3 days ago

Thanks to @jyotipm29 we are back on track :smile: The new 24.1 image contains a lot of changes and reflects the latest developments in Galaxy.

Please test the new version, e.g. with:

docker run -p 8080:80 -p 8021:21 -p 4002:4002 --privileged=true -e "GALAXY_DESTINATIONS_DEFAULT=slurm_cluster_docker"   -v /tmp/galaxy-data/:/export/ quay.io/bgruening/galaxy:24.1

... or any other combination. The readme has been updated. Please add any useful tips to it.

For a list of changes, see the Changelog.

Feel free to reopen the ticket, if you have still any problem, Thanks for your interest!