Closed mtekman closed 4 years ago
Future reference (to me), to test locally:
conda create -n gie pip
conda activate gie
pip install git+https://github.com/mtekman/galaxy_ie_helpers.git
GALAXY_URL=https://usegalaxy.eu HISTORY_ID=424b38f7b103b91f API_KEY=[blahblahblah]
~/miniconda3/envs/gie/bin/get -i ".*annotation.*" -t regex
> ['/import/3', '/import/7']
@bgruening this looks like it works fine
Thanks.
Added
find_matching_history_ids
function which can be used to find datasets in a history matching regex pattern(s). These can then be fed into theget
function. This should allow notebooks to be more flexible in how they import data especially with respect to workflows.@bgruening is this function automatically exported?