Closed abueg closed 1 year ago
LGTM! Do you think you need that output by default?
I think it'd be useful as default -- the noseq files are better for users to download for visualization/manipulation/sharing because of their smaller size
Then lets get this in!
👋🏼 !
I have edited the hifiasm xml to output the
noseq.gfa
files as a collection. I have added a line at the end of the tool's command to make a noseq folder and put the noseq files in there. They are small files (they're the GFAs minus the actual sequence, so much smaller) so I have them output by default.