Closed Delphine-L closed 3 months ago
Hi ! Version 9.3+galaxy0 of Search in textfiles (grep) (https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_grep_tool/9.3+galaxy0) fails with the error Fatal error: Exit code 1 () when the query returns no results. When using version 1.1.1, the job is not failing and is simply returning an empty output.
Fatal error: Exit code 1 ()
Example history : https://usegalaxy.eu/u/delphine-l/h/exemple-grep
This is most likely due to the new profile.
grep .. | grep -v "^--"
--no-group-separator
grep ... || [ $? -eq 1 ]
Hi ! Version 9.3+galaxy0 of Search in textfiles (grep) (https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_grep_tool/9.3+galaxy0) fails with the error
Fatal error: Exit code 1 ()
when the query returns no results. When using version 1.1.1, the job is not failing and is simply returning an empty output.Example history : https://usegalaxy.eu/u/delphine-l/h/exemple-grep