bgruening / galaxytools

:microscope::books: Galaxy Tool wrappers
MIT License
116 stars 227 forks source link

add graphprot log output to find error in Galaxy version #1432

Closed michauhl closed 3 months ago

michauhl commented 3 months ago

Hi, GraphProt on Galaxy currently does not work. I added the --gp-output to also get GraphProt log outputs, otherwise there is no way telling what the issue is. Offline GraphProt conda version fresh install works fine with the Galaxy python wrapper scripts, just tried. Best, Michael

bgruening commented 3 months ago

Do you get any error message?

michauhl commented 3 months ago

On Galaxy the output just says "output file not found", so not informative. Locally everything works fine. --gp-output gives full output of GraphProt