Nice work, this should function. Let's make some small changes to improve usability, though.
1) Please provide a description with what you changed along with the PR.
2) Can you please create separate rules and expected output files for each of the possible spades assemblies? This has some advantages over the current design:
a) Allows for running of multiple spades versions in the same directory
b) Allows for custom resource allocation for each version
You can use the same logic as what separates spades/megahit currently.
Nice work, this should function. Let's make some small changes to improve usability, though.
1) Please provide a description with what you changed along with the PR. 2) Can you please create separate rules and expected output files for each of the possible spades assemblies? This has some advantages over the current design: a) Allows for running of multiple spades versions in the same directory b) Allows for custom resource allocation for each version You can use the same logic as what separates spades/megahit currently.