Closed jribado closed 5 years ago
Example with 3 input files (paths removed for clarity) -- leads to misplaced reads by name
sync.py FS102_T15_1_val_1.fq.gz FS102_T15_nodup_PE1.fastq FS102_T15_nodup_PE2.fastq FS102_T15_2.fastq FS102_T15_orphans.fastq FS102_T15_1.fastq
Total 18956 reads from forward read file. Total 0 reads from reverse read file. Synced read files contain 0 reads. Put 18956 forward reads in the orphans file. Put 0 reverse reads in the orphans file.
Example with 3 input files (paths removed for clarity) -- leads to misplaced reads by name
sync.py FS102_T15_1_val_1.fq.gz FS102_T15_nodup_PE1.fastq FS102_T15_nodup_PE2.fastq FS102_T15_2.fastq FS102_T15_orphans.fastq FS102_T15_1.fastq
Total 18956 reads from forward read file. Total 0 reads from reverse read file. Synced read files contain 0 reads. Put 18956 forward reads in the orphans file. Put 0 reverse reads in the orphans file.