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bhklab / CoreGx

Shared code for both PharmacoGx and RadioGx
https://bhklab.github.io/CoreGx/
GNU General Public License v3.0
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Weird Bug in Printing the LongTable/TRE #158

Closed p-smirnov closed 2 years ago

p-smirnov commented 2 years ago 
<TreatmentResponseExperiment> 
dim:  10080 62 
assays(7): response ... mono_profiles mono_fits combo_response profiles ... mono_profiles mono_fits combo_response assay_metadata ... mono_profiles mono_fits combo_response 
rownames(10080): 1,3-Bis(2-chloroethyl)-1-nitrosourea::0.05:NA:1 1,3-Bis(2-chloroethyl)-1-nitrosourea::0.15:NA:1 ... Vorinostat:Vincristine:1:0.01:1 Vorinostat:Vincristine:1:0.1:1 
rowData(9): treatment1id treatment2id treatment1dose ... CONC2 NSC2 CONCINDEX2 
colnames(62): 786-O:1 A-498:1 A-549:1 ... UACC-257:1 UACC-62:1 UO-31:1 
colData(6): sampleid bio_rep CELLNAME CELLNBR PANEL PANELNBR 
metadata(1): experiment_metadata

There are only 7 assays, but things are printed multiple times. Cosmetic issue, but a bit confusing.

ChristopherEeles commented 2 years ago

Yea I noticed this one already but didn't fix it since it was kind of an edge case.

Will have a fix pushed shortly.

Best, Chris

ChristopherEeles commented 2 years ago

Why did my merge not auto-close this?!